SENNA is a fast neural-network architecture for semantic extraction from text.
full storyMiLDe
MiLDe is an integrated development environment with a suite of machine learning tools including SVMs, Neural Networks (using the Torch package), image analysis, numeric functions and dataset handling. full story
Torch
Torch 5 provides a matlab-like environment
for state-of-the-art machine
learning algorithms. It is easy to use and provides a very efficient
implementation,
thanks to a easy and fast scripting language (Lua) and a underlying
C implementation.
full storySVM-Fold
SVM-FOLD is a web server that makes predictions of family, superfamily and fold level
classifications of proteins based on the Structural Classification of Proteins
(SCOP) hierarchy using the
SVM learning algorithm.
RankProp
RankProp is a ranking algorithm that exploits the entire network structure of
similarity relationships among proteins in a sequence database by performing a
diffusion operation on a pre-computed, weighted network. The resulting ranking
algorithm, evaluated using a human-curated database of protein structures,
is efficient and provides significantly better rankings than a local network
search algorithm such as PSI-BLAST.